PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G283900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 179aa    MW: 20119.8 Da    PI: 10.5186
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G283900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-112975251
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
                HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                       r+ h+ +Er RR+ +++ f  L +llP+a   +  + + ++iLe+ ++YI
  Aqcoe3G283900.1.p 29 RERHKLAERERRKSMRELFLSLHSLLPQA---STVRKEQSSILEEIIKYI 75
                       899**************************...9999*************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.09E-112092IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.0552778IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.19E-72975No hitNo description
PfamPF000102.6E-82975IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-92992IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00663391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MSVEGNKDWE TVSSEGKSWR SSGTPNNARE RHKLAERERR KSMRELFLSL HSLLPQASTV  60
RKEQSSILEE IIKYIPIAAA RLRSLQNRKD SVPLNISNKT LSPAIQVSNK KSLDSLNSNN  120
KGTSQALLLS SAILDELEAH NLELVRSTHC RDGSKVLHHS ECKLRKSSTF KRTFDQLD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246746.14e-57PREDICTED: uncharacterized protein LOC104589957
TrEMBLE3WDH24e-76E3WDH2_COPJA; BHLH transcriptional factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-06bHLH family protein